Showing posts with label RPy2. Show all posts
Showing posts with label RPy2. Show all posts

Monday, September 16, 2013

Creating a Mountain Lion development environment

So I had to set up a new dev environment at work on Mountain Lion. It uses the following components

  • Hombrew
  • Python 2.7.5
  • Django 1.5.2
  • Apache 2.2.25
  • Postgres 9.2.4
  • R 3.0.1
  • Virtualenv
and a bunch of other python libraries and stuff. This system is set up for Bioinformatics development, so there are things that are specific to that. The build is documented on our internal wiki, but I copied the build instructions to the *new* code.ex(python) wiki in my personal github account. The direct link to the build instructions is here.

Thursday, July 25, 2013

How to subset RPy2 dataframe

This example demonstrates how to create subsets of RPy2 data frames using single or multiple criteria. I also wanted to test if using Github Gist is a better way the display code snippets on this blog than using Bloggers formatting tools.

And linked gist is here