So apparently upgrading to the Macintosh system Mountain Lion (10.8) breaks the unix "locate" command because it deletes the "nobody" user that was used to own the database.
I found this
gist that gives instructions how to get it working again. However, in my case I also had to enable the root user and then log in as root in Terminal and run the command
/usr/libexec/locate.updatedb
as root. Then it finally worked. Sheesh.
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